Gene: TSBP1

Alternate names for this Gene: C6orf10|TSBP

Gene Summary:

Gene is located in Chromosome: 6

Location in Chromosome : 6p21.32

Description of this Gene: testis expressed basic protein 1

Type of Gene: protein-coding

Gene: TSBP1-AS1

Alternate names for this Gene: -

Gene Summary:

Gene is located in Chromosome: 6

Location in Chromosome : 6p21.32

Description of this Gene: TSBP1 and BTNL2 antisense RNA 1

Type of Gene: ncRNA

rs6906662 in TSBP1;TSBP1-AS1 gene and ACQUIRED IMMUNODEFICIENCY SYNDROME, PROGRESSION TO PMID 20041166 2009 Common genetic variation and the control of HIV-1 in humans.

PMID 21051598 2010 The major genetic determinants of HIV-1 control affect HLA class I peptide presentation.

rs6906662 in TSBP1;TSBP1-AS1 gene and AIDS, PROGRESSION TO PMID 20041166 2009 Common genetic variation and the control of HIV-1 in humans.

PMID 21051598 2010 The major genetic determinants of HIV-1 control affect HLA class I peptide presentation.

rs1265763 in TSBP1;TSBP1-AS1 gene and Allergic Reaction PMID 23817569 2013 A genome-wide association meta-analysis of self-reported allergy identifies shared and allergy-specific susceptibility loci.

rs2395148 in TSBP1;TSBP1-AS1 gene and Biliary cirrhosis PMID 19458352 2009 Primary biliary cirrhosis associated with HLA, IL12A, and IL12RB2 variants.

rs9501618 in TSBP1;TSBP1-AS1 gene and Blood Protein Measurement PMID 29875488 2018 Genomic atlas of the human plasma proteome.

rs3129900 in TSBP1;TSBP1-AS1 gene and Chemical and Drug Induced Liver Injury PMID 20639878 2010 A genome-wide study identifies HLA alleles associated with lumiracoxib-related liver injury.

rs115558405 in TSBP1;TSBP1-AS1 gene and Child Development Disorders, Pervasive PMID 28540026 2017 Meta-analysis of GWAS of over 16,000 individuals with autism spectrum disorder highlights a novel locus at 10q24.32 and a significant overlap with schizophrenia.

rs9268402 in TSBP1;TSBP1-AS1 gene and Coronary heart disease PMID 22751097 2012 Genome-wide association study in Han Chinese identifies four new susceptibility loci for coronary artery disease.

rs1474728 in TSBP1;TSBP1-AS1 gene and Corpuscular Hemoglobin Concentration Mean PMID 23222517 2012 Seventy-five genetic loci influencing the human red blood cell.

rs9469099 in TSBP1;TSBP1-AS1 gene and Dermatitis, Atopic PMID 23042114 2012 Genome-wide association study identifies eight new susceptibility loci for atopic dermatitis in the Japanese population.

rs1265759 in TSBP1;TSBP1-AS1 gene and Diabetes Mellitus, Insulin-Dependent PMID 17632545 2007 A genome-wide association study identifies KIAA0350 as a type 1 diabetes gene.

rs2050188 in TSBP1;TSBP1-AS1 gene and Diabetes Mellitus, Non-Insulin-Dependent PMID 28869590 2017 Identification of new susceptibility loci for type 2 diabetes and shared etiological pathways with coronary heart disease.

rs2849018 in TSBP1;TSBP1-AS1 gene and Diastolic blood pressure PMID 30578418 2019 Trans-ethnic association study of blood pressure determinants in over 750,000 individuals.

rs2273017 in TSBP1;TSBP1-AS1 gene and Graves Disease PMID 21900946 2011 Multivariate stepwise logistic regression analysis selected rs3893464, rs4313034, rs3132613, rs4248154, rs2273017, rs9394159 and rs4713693, as markers for independent risk loci for GD.

rs6906662 in TSBP1;TSBP1-AS1 gene and HIV-1, RESISTANCE TO PMID 21051598 2010 The major genetic determinants of HIV-1 control affect HLA class I peptide presentation.

PMID 20041166 2009 Common genetic variation and the control of HIV-1 in humans.

rs6906662 in TSBP1;TSBP1-AS1 gene and HUMAN IMMUNODEFICIENCY VIRUS TYPE 1, SUSCEPTIBILITY TO PMID 20041166 2009 Common genetic variation and the control of HIV-1 in humans.

PMID 21051598 2010 The major genetic determinants of HIV-1 control affect HLA class I peptide presentation.

rs2395148 in TSBP1;TSBP1-AS1 gene and Juvenile arthritis PMID 18576341 2008 Association of the TRAF1-C5 locus on chromosome 9 with juvenile idiopathic arthritis.

rs6457536 in TSBP1;TSBP1-AS1 gene and Lupus Erythematosus, Systemic PMID 24871463 2014 GWAS identifies novel SLE susceptibility genes and explains the association of the HLA region.

rs3129932 in TSBP1;TSBP1-AS1 gene and Lymphocyte Count measurement PMID 22286170 2012 The combination of a genome-wide association study of lymphocyte count and analysis of gene expression data reveals novel asthma candidate genes.

rs3129900 in TSBP1;TSBP1-AS1 gene and Multiple Sclerosis PMID 17660530 2007 Risk alleles for multiple sclerosis identified by a genomewide study.

PMID 22457343 2012 A genome-wide association study in progressive multiple sclerosis.

PMID 18941528 2008 Identification of a novel risk locus for multiple sclerosis at 13q31.3 by a pooled genome-wide scan of 500,000 single nucleotide polymorphisms.

PMID 20598377 2010 Evidence for VAV2 and ZNF433 as susceptibility genes for multiple sclerosis.

rs3129900 in TSBP1;TSBP1-AS1 gene and Narcolepsy PMID 20711174 2010 Genome-wide association study identifies new HLA class II haplotypes strongly protective against narcolepsy.

PMID 19629137 2009 Genome-wide association database developed in the Japanese Integrated Database Project.

rs498422 in TSBP1;TSBP1-AS1 gene and Non-obstructive azoospermia PMID 22541561 2012 A genome-wide association study reveals that variants within the HLA region are associated with risk for nonobstructive azoospermia.

rs2395148 in TSBP1;TSBP1-AS1 gene and Primary biliary cirrhosis PMID 19458352 2009 Primary biliary cirrhosis associated with HLA, IL12A, and IL12RB2 variants.

rs28366179 in TSBP1;TSBP1-AS1 gene and Reticulocyte count (procedure) PMID 27863252 2016 The Allelic Landscape of Human Blood Cell Trait Variation and Links to Common Complex Disease.

rs1018434 in TSBP1;TSBP1-AS1 gene and Rheumatoid Arthritis PMID 21156761 2011 A genome-wide association study suggests contrasting associations in ACPA-positive versus ACPA-negative rheumatoid arthritis.

PMID 19503088 2009 REL, encoding a member of the NF-kappaB family of transcription factors, is a newly defined risk locus for rheumatoid arthritis.

PMID 17804836 2007 TRAF1-C5 as a risk locus for rheumatoid arthritis--a genomewide study.

PMID 17159887 2007 Genomic DNA pooling for whole-genome association scans in complex disease: empirical demonstration of efficacy in rheumatoid arthritis.

PMID 24449572 2014 Novel rheumatoid arthritis susceptibility locus at 22q12 identified in an extended UK genome-wide association study.

PMID 20453842 2010 Genome-wide association study meta-analysis identifies seven new rheumatoid arthritis risk loci.

rs1265757 in TSBP1;TSBP1-AS1 gene and Sarcoidosis PMID 26651848 2016 High-Density Genetic Mapping Identifies New Susceptibility Variants in Sarcoidosis Phenotypes and Shows Genomic-driven Phenotypic Differences.

PMID 22952805 2012 Genome-wide association study of African and European Americans implicates multiple shared and ethnic specific loci in sarcoidosis susceptibility.

PMID 19165924 2008 Genome-wide association study identifies ANXA11 as a new susceptibility locus for sarcoidosis.

rs115558405 in TSBP1;TSBP1-AS1 gene and Schizophrenia PMID 28540026 2017 Meta-analysis of GWAS of over 16,000 individuals with autism spectrum disorder highlights a novel locus at 10q24.32 and a significant overlap with schizophrenia.

rs114937304 in TSBP1;TSBP1-AS1 gene and Squamous cell carcinoma of lung PMID 28604730 2017 Large-scale association analysis identifies new lung cancer susceptibility loci and heterogeneity in genetic susceptibility across histological subtypes.